2016 Publications

 Publications Listed for 2016

  1. Tian, F., Yang, W., Mordes, D., Wang, JY., Salameh, JS., Mok, Joanie., Chew, J., Sharma, A., Leno-Duran, E., Suzuki-Uematsu, S., Suzuki, N., Han, SS., Lu, FK., Ji, Minbiao., Zhang, R., Liu, Y., Strominger, J., Shneider, NA., Petrucelli, L., Xie,. S & Eggan, K. Monitoring peripheral nerve degeneration in ALS by label-free stimulated Raman scattering imaging. Nat. Commun. 7, 13283 doi: 10.1038/ncomms13283 (2016).
    Kevin Eggan Lab (SCRB)
  2. Cho H, Wivagg CN, Kapoor, M, Barry Z, Rohs PD, Suh H, Marto JA, Garner, EC. Bernhardt TG. Bacterial cell wall biogenesis is mediated by SEDS and PBP polymerase families functioning semi-autonomously. Nat Microbiol. 2016;:16172. PMID: 27643381 PMCID: PMC5030067
    Ethan Garner Lab (MCB)
  3. Bozzi, AT, Bane LB, Weihofen WA, McCabe AL, Singharoy A, Chipot CJ, Schulten K, Gaudet, R. Conserved methionine dictates substrate preference in Nramp-family divalent metal transporters. Proc Natl Acad Sci USA. 2016;113(37):10310-5. PMID: 27573840 PMCID: PMC5027461
    Rachelle Gaudet Lab (MCB)
  4. Wang S, Su, JH., Beliveau BJ, Bintu B, Moffitt JR, Wu CT, Zhuang, X. Spatial organization of chromatin domains and compartments in single chromosomes. Science. 2016;353(6299):598-602. PMID: 27445307 PMCID: PMC4991974
    Xiaowei Zhuang Lab (CCB)
  5. Lee, J, Xue M, Wzorek JS, Wu T, Grabowicz M, Gronenberg LS, Sutterlin HA, Davis RM, Ruiz N, Silhavy TJ, Kahne, DE. Characterization of a stalled complex on the β-barrel assembly machine. Proc Natl Acad Sci USA. 2016;113(31):8717-22. PMID: 27439868 PMCID: PMC4978274
    Daniel Kahne Lab (CCB)
  6. Perez, JD., Rubinstein ND, Dulac, C. New Perspectives on Genomic Imprinting, an Essential and Multifaceted Mode of Epigenetic Control in the Developing and Adult Brain. Annu Rev Neurosci. 2016;39:347-84. PMID: 27145912
    Catherine Dulac Lab (MCB)
  7. Lassen KG, McKenzie CI, Mari M, Murano T, Begun J, Baxt LA, Goel G, Villablanca EJ, Kuo, SY., Huang H, Macia L, Bhan AK, Batten M, Daly MJ, Reggiori F, Mackay CR, Xavier RJ. Genetic Coding Variant in GPR65 Alters Lysosomal pH and Links Lysosomal Dysfunction with Colitis Risk. Immunity. 2016;44(6):1392-405. PMID: 27287411 PMCID: PMC4936415
    Stuart Schreiber Lab (CCB)
  8. Wang S, Su, JH., Zhang F, Zhuang, X. An RNA-aptamer-based two-color CRISPR labeling system. Sci Rep. 2016;6:26857. PMID: 27229896 PMCID: PMC4882555
    Xiaowei Zhuang Lab (CCB)
  9. Ferreira, LM., Meissner TB, Mikkelsen TS, Mallard W, O’Donnell CW, Tilburgs T, Gomes HA, Camahort R, Sherwood RI6, Gifford DK, Rinn JL, Cowan, CA., Strominger, JL. A distant trophoblast-specific enhancer controls HLA-G expression at the maternal-fetal interface. Proc Natl Acad Sci USA. 2016;113(19):5364-9. PMID: 27078102 PMCID: PMC4868469
    Chad Cowan Lab (SCRB)
    Jack Strominger Lab (MCB)
  10. Estrada J, Ruiz-herrero T, Scholes, C., Wunderlich Z, Depace, AH. SiteOut: An Online Tool to Design Binding Site-Free DNA Sequences. PLoS ONE. 2016;11(3):e0151740. PMID: 26987123 PMCID: PMC4795680
    Angela DePace Lab (HMS SYSBIO)
  11. Zee, BM., Alekseyenko, AA., McElroy, KA., Kuroda, MI. Streamlined discovery of cross-linked chromatin complexes and associated histone modifications by mass spectrometry. Proc Natl Acad Sci USA. 2016;113(7):1784-9. PMID: 26831069PMCID: PMC4763777
    Mitzi Kuroda Lab (HMS GENETICS)
  12. Cabeen, M. T., Leiman, S. A. and Losick, R. (2016), Colony-morphology screening uncovers a role for the Pseudomonas aeruginosa nitrogen-related phosphotransferase system in biofilm formation. Molecular Microbiology, 99: 557–570. doi:10.1111/mmi.13250. PMID: 26483285
    Richard Losick Lab (MCB)
  13. Tabebordbar M, Zhu, K., Cheng JK, Chew WL, Widrick JJ, Yan WX, Maesner C, Wu EY, Xiao R, Ran FA, Cong L, Zhang F, Vandenberghe LH, Church GM, Wagers, AJ. In vivo gene editing in dystrophic mouse muscle and muscle stem cells. Science. 2016;351(6271):407-11. PMID: 26721686 PMCID: PMC4924477
    Amy Wagers Lab (SCRB)
  14. Thomsen ER, Mich JK, Yao Z, Hodge RD, Doyle AM, Jang, S, Shehata SI, Nelson AM, Shapovalova NV, Levi BP, Ramanathan, S. Fixed single-cell transcriptomic characterization of human radial glial diversity. Nat Methods. 2016;13(1):87-93. PMID: 26524239 PMCID: PMC4869711
    Sharad Ramanathan Lab (MCB)
  15. Bozzi, A et al., Crystal Structure and Conformational Change Mechanism of a Bacterial Nramp-Family Divalent Metal Transporter Structure (2016), http://dx.doi.org/10.1016/j.str.2016.09.017 in press
    Rachelle Gaudet Lab (MCB)
  16. Lessing, D, Dial, TO, Wei, C, Payer, B, Carrette, LLG, Kesner, B, Szanto, A, Jadhav, A, Maloney, DJ, Simeonov, A, Theriault, J, Hasaka, T, Bedalov, A, Bartolomei, M, and Lee, JT. (2016) A high-throughput small molecule screen identifies synergism between DNA methylation and Aurora kinase pathways for X reactivation. Proc. Natl. Acad. Sci., 113(50):14366–71.